关于“DNA存储”的学习笔记
作者:颜林林 yanlinlin82@gmail.com
授权:本文遵循CC-BY-4.0协议,可在保留原出处信息时进行自由分享,更多关于该协议的信息可参见此处。
动机
不知道为什么,自己对“以DNA为介质实现存储设备”的构想,竟然盲目地乐观。这个曾经非常遥远的科学幻想,在近几年突然变得似乎很接近现实。为避免甘于慵懒地旁观,我决定凭借自己的业余兴趣,勇敢地开始接触并了解这个领域,从收集相关资料开始,逐步深入学习。希望通过这个过程,让自己的“盲目”变得稍微少一些。
研究论文
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2020 - Nature Communications - Low cost DNA data storage using photolithographic synthesis and advanced information reconstruction and error correction. (doi: 10.1038/s41467-020-19148-3)
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An Efficient and Secure Forward Error Correcting Scheme for DNA Data Storage
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2019 - Nat Biotechnol. - A DNA-of-things storage architecture to create materials with embedded memory. (doi:10.1038/s41587-019-0356-z)
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2018 - Genomics & Informatics - Storing Digital Information in the Long Read DNA (doi:10.5808/GI.2018.16.4.e30)
- 韩国汉东环球大学发表,使用长读长(~1,000 bp)DNA的数据编解码方案;相比之前的方法,使用更少的reads(更低测序深度),以减少测序时间。
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2013 - Nature - Toward practical high-capacity low-maintenance storage of digital information in synthesised DNA (doi:10.1038/nature11875)
- 由EBI与Agilent合作,将739kb(约合5.2x10^6 bits)数据编码到DNA中,并100%准确还原回来。
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2012 - Science - Next-Generation Digital Information Storage in DNA (doi:10.1126/science.1226355)
- 将一本5.27Mb的内容,编码写入DNA芯片,再使用NGS(Next Generation Sequencing)技术将其读出。
综述报道
- 2020-12-09 - Science Advances - Aerolysin nanopores decode digital information stored in tailored macromolecular analytes (doi:10.1126/sciadv.abc2661)
- 2019-03-21 - Nature | Scientific Reports - Demonstration of End-to-End Automation of DNA Data Storage (doi:10.1038/s41598-019-41228-8)
- 2018-05-04 - 3 Biotech | DNA as a digital information storage device: hope or hype? (doi:10.1007/s13205-018-1246-7)
- 2017-05-03 - Science | This Week in Science - A reliable and efficient DNA storage architecture (doi:10.1126/science.355.6328.920-e)
- 2017-03-02 - Science | News - DNA could store all of the world’s data in one room (doi:10.1126/science.aal0852)
- 2016-09-02 - Nature | News - How DNA could store all the world’s data (doi:10.1038/537022a)
- 2016-03-23 - Nature Materials | Commentary - Nucleic acid memory (doi:10.1038/nmat4594)
- 2015-09-02 - Nature | News - The tiniest Lego: a tale of nanoscale motors, rotors, switches and pumps (doi:10.1038/525018a)
- 2013-01-23 - Nature | News - Synthetic double-helix faithfully stores Shakespeare’s sonnets (doi:10.1038/nature.2013.12279)
- 2012-08-16 - Nature | News - DNA data storage breaks records (doi:10.1038/nature.2012.11194)
业界新闻
2021-01-15
2021-01-14
2021-01-13
- Direct digital-to-biological data storage in DNA in living cells
- DNA hard drives? Scientists hide a coded digital message in bacterial DNA
2021-01-12
- Scientists store data inside living bacterial DNA for the first time
- Scientists Developing Ways To Store Data in Living Bacteria
2021-01-11
2021-01-09
2021-01-07
2021-01-06
2021-01-05
2020-12-14
2020-12-09
- Bacterial nanopores open the future of data storage
- DNA Revolution Is Here — One Small Stock Set for 10X Gains
2020-12-07
2020-12-05
- Twist Bioscience: A Breakout Year For Its Synthetic DNA Platform
- Twist Bioscience Corporation (TWST) Prices 2.8M Share Upsized Common Offering at $110/Sh
2020-12-01
2020-11-25
- Scientists Put The Wizard Of Oz On A Strand Of DNA
- Twist Bioscience Reports Fourth Quarter and Full Year Fiscal 2020 Financial Results
2020-11-22
- A huge true random number using DNA synthesis
- Researchers have generated a huge true random number using DNA synthesis
2020-11-17
2020-11-16
- Western Digital, Microsoft and all that DNA storage jazz
- Microsoft opens up new alliance to spur on data storage on DNA
2020-11-15
2020-11-14
- Firms partner with Microsoft to advance DNA data storage
- Microsoft, Illumina & Twist ally to make big data small, by weaving it into DNA archives
2020-11-13
- Microsoft helps found an industry alliance to advance DNA data storage systems
- Twist Bioscience and Illumina part of alliance to advance DNA data storage
2020-11-06
- Revolutionary synthetic DNA disk could hold key to future of storage
- DNA-Based Molecular Tagging System, “Porcupine,” Could Feasibly Replace Printed or Plastic Barcodes
- Europe furthers the excellence of CIC biomaGUNE
2020-11-03
2020-11-01
2020-10-31
- Magic: The Wizard of Oz successfully stored and retrieved on DNA
- Top 5 predictions that will shape IT industry in 2021
2020-10-28
- Twist Bioscience Collaborates With Beyond Earth to Launch Artwork Stored in DNA Into Space
- Gartner: 10 predictions for the next decade of IT
- Biotech future of promise and peril looms larger and closer
2020-10-27
- Gartner: Top 10 Strategic Predictions for 2021 and Beyond
- What are the New Trends and Opportunities in Video Storage?
2020-10-23
- Synthetic DNA Holds Great Promise For Data Storage
- Gartner’s predictions show CIOs’ expanding responsibility — and authority
- Gartner reveals its top IT predictions for 2021 and beyond
2020-10-20
- Microsoft: Your Cloud Data May Soon Be Stored in DNA and Holograms
- Molecular computing: DNA-inspired advanced computers
- Cellular ‘pantry’ of sorts, lipid droplets double as home security system
2020-10-16
2020-09-29
- A DNA “printer”, the futuristic vision of a small French company
- When Will DNA Solve the Data Storage Crisis?
- World’s First Petabyte Hard Disk Drive Contains Glass for Better Storage Capacity
2020-09-15
2020-09-11
2020-09-09
2020-09-08
- Catalog bags $10 mil to fund DNA storage tech
- Biohackers and the glass bead DNA storage game
- A New Type of Meta-DNA Structure
2020-09-04
- Video: Former IBMer Dave Turek Explains DNA-based Storage and its Place in the Compute Landscape to Come
- ‘Just a Small Bit of DNA Theoretically Fits 200 Exabytes of Data’
2020-09-03
2020-09-01
2020-08-20
- Twist Bioscience Synthetic DNA Stores New Netflix Original Series ‘BIOHACKERS’
- Resero Genomics Launches Customer-focused DNA Banking
2020-08-18
2020-08-14
2020-07-15
2020-07-14
2020-06-24
2020-06-16
- University of Washington and Microsoft researchers win award for DNA-based data storage
- Scientists Develop New Scalable DNA-Based Data Storage System
2020-06-13
2020-06-12
2020-05-19
2020-05-05
2020-04-15
- Using DNA-like punch cards to store data
- Molecular Assemblies Appoints Todd C. Peterson to Board of Directors
2020-04-08
- “Punch Card” DNA Could Mean Cheaper High-Capacity Data Storage
- Faster Rewritable Data Storage Made Possible by DNA Lego Bricks
2020-04-07
2020-03-06
2020-02-26
2020-02-24
2020-02-20
2020-02-18
2020-02-16
2020-02-11
2020-02-05
- A Smear of DNA Can Hold 10,000 Gigabytes of Data
- Alternative Computing
- Where Computing Is Headed—Beyond Quantum
- Researchers report progress on molecular data storage system
2020-02-04
- Progress on molecular data storage system
- Researchers report progress on molecular data storage system
- Researchers report progress on molecular data storage system
2020-02-03
2020-01-27
2020-01-23
2020-01-21
2020-01-18
2020-01-17
2020-01-16
2020-01-15
2020-01-11
2020-01-06
2020-01-03
2019-12-25
- For Data Storage, Mother Nature Knows Best
- Instructions Included: 3D-Printed “DNA” Is Stored in Everyday Objects
- SGI-DNA Appoints Brian Donnelly as Chief Commercial Officer
2019-12-18
2019-12-17
- ‘DNA-of-Things’ Technology Can Store Bitcoin Passwords in Everyday Objects
- ‘DNA it’ a new way in the Object Store Digital Memory Works
- How healthcare organizations can achieve operational efficiencies
2019-12-16
2019-12-14
- DNA as a content storage device is closer than you think
- This 3D-printed Stanford bunny also holds the data for its own reproduction
2019-12-12
- DNA NUCLEOTIDES: THE NEXT ERA OF DATA STORAGE?
- How To Hide Data in Everyday Objects
- Twist Bioscience Reports Fourth Quarter and Full Year Fiscal 2019 Financial Results
- DNA Embedded Into Everyday Objects Creates Perfect Clones of the Stanford Bunny
2019-12-11
- Object Engineered to Carry a DNA Code for its Own Replication
- Israeli, Swiss scientists use DNA storage to keep helpful data in objects
- New ‘DNA of Things’ Method Stores Digital Memory in Common Objects
- SCIENTISTS DEVISE DNA-OF-THINGS, STORES .STLS IN 3D PRINTED OBJECTS
- Generations of Bunnies
- These Plastic Bunnies Got a DNA Upgrade. Next up, the World?
- DNA Storage Architecture Could Be Used to Store Health Records, Develop Self-Replicating Machines | GenomeWeb
- Storing data in everyday objects | EurekAlert! Science News
- Why DNA is the thumb drive of the future | Genetic Literacy Project
- Data Can Be in Everyday Objects - Agro Ecology Innovations
2019-12-09
2019-11-28
2019-11-27
- Waterford team celebrating after landing top digital technology award
- Digital DNA storage research from WIT wins Outstanding Academic Achievement Award
2019-11-22
2019-11-20
- SGI-DNA Launches Gibson Assembly® RapidAMP™ Technology for its BioXp™ Gene Builder
- HashCash and Major Pharma Company Create Blockchain Platform for DNA Sequencing
2019-11-19
- Watch Out: 7 Digital Disruptions for IT Leaders
- DNA Synthesis: Tackling the Main Bottleneck in Biology Research
- Delivering datacentre performance and cost savings with Intel Optane technology
- Global Synthetic Biology Market, Segmentation By Technology, Application and Product Type Research Report
2019-11-15
- DNA Test Results Stress Some People Out
- These startups are developing new ways to reprogram biology by producing custom genes from scratch
- DNA Could Be One of a Million Possible Genetic Molecules
- Researchers Find more than 1 million Alternatives to DNA
- DNA may hold clue to protecting endangered species
- DNA may hold the clue to protecting endangered species
2019-10-10
- DoC researchers to lead a research project on DNA storage & computation
- Gibson Assembly® Advances Field of DNA Digital Data Storage
2019-09-01
2019-08-27
- Innovation Origins - Top 10 Emerging Technologies (9): DNA Data Storage
2019-08-23
2019-03-22
2017-05-22
- MIT Technology Review - Microsoft Has a Plan to Add DNA Data Storage to Its Cloud